BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025E05SP1|AL428395
(860 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig435 1668 0.0
>3x_Contig435
Length = 1599
Score = 1668 bits (840), Expect = 0.0
Identities = 854/860 (99%)
Strand = Plus / Plus
Query: 1 caaaagtcttttttggtcccttcttttgattctttcttctagccatttctcctgcttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 caaaagtcttttttggtcccttcttttgattctttcttctagccatttctcctgcttgta 667
Query: 61 tgttgcactagttctggtaagagagaaccgaataaacccaacagcaagacacacaagacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tgttgcactagttctggtaagagagaaccgaataaacccaacagcaagacacacaagacc 727
Query: 121 gtatctgacaggaaacaatgctcatctcatcgcatcatcaacggattctaattttcactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 gtatctgacaggaaacaatgctcatctcatcgcatcatcaacggattctaattttcactt 787
Query: 181 tttcttttcttcaaagtctcggaaaattttcaagtcacgtggtatgtaaatagagagact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 tttcttttcttcaaagtctcggaaaattttcaagtcacgtggtatgtaaatagagagact 847
Query: 241 ggatcaggtacacaatggaaggcatgtaaaacacacacactaagtagtattacctctaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 ggatcaggtacacaatggaaggcatgtaaaacacacacactaagtagtattacctctaaa 907
Query: 301 tatcagctggtgagtatctgtaatttatatccttgctaatctgttgagaaaccccttcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 tatcagctggtgagtatctgtaatttatatccttgctaatctgttgagaaaccccttcag 967
Query: 361 acacggatccagtttccggcagcactaagtaatcttcgatccatttctccaataaccaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 acacggatccagtttccggcagcactaagtaatcttcgatccatttctccaataaccaac 1027
Query: 421 taattgtgatgagactggtctcatcgaatcgtttcactagatgcgggtacctttgtaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 taattgtgatgagactggtctcatcgaatcgtttcactagatgcgggtacctttgtaaga 1087
Query: 481 tgagttgtgtcaaaaagtaatgcaccactttcgtatcaatagtgggtaatctcgtttgtr 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 tgagttgtgtcaaaaagtaatgcaccactttcgtatcaatagtgggtaatctcgtttgta 1147
Query: 541 attcgtctctagtcaataatgggattggaacgatatggttcaaccttaaaccaaggcatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1148 attcgtctctagtcaataatgggattggaacgatatggttcaaccttaaaccaaggcatt 1207
Query: 601 catccggtgaaagaattgatccatttggacctttgacgaggttatggcttgcttcatata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1208 catccggtgaaagaattgatccatttggacctttgacgaggttatggcttgcttcatata 1267
Query: 661 cgtttgcgttcattggaggtatgcttttggaatgctaaatggctgtgtatagtatgaacc 720
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1268 cgtttgccttcattggaggtatgcttttggaatgctaaatggctgtgtatagtatgaacc 1327
Query: 721 ggggaaacagaagttgttgtagttatgtgcaattcacaattttttaacatagtgagatag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1328 ggggaaacagaagttgttgtagttatgtgcaattcacaattttttaacatagtgagatag 1387
Query: 781 ttcaaatttaaactagacaaacagtgcagcttcgckggagtattttgttgaatgatgaat 840
||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||
Sbjct: 1388 ttcaaatttaaactagacaaacagtgcagcttcgcgggagtatttgttcgaatgatgaat 1447
Query: 841 cagtgcacgacgctagccat 860
||||||||||||||||||||
Sbjct: 1448 cagtgcacgacgctagccat 1467
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7164
Number of Sequences: 1807
Number of extensions: 7164
Number of successful extensions: 97
Number of sequences better than 1.0e-20: 1
length of query: 860
length of database: 10,358,551
effective HSP length: 16
effective length of query: 844
effective length of database: 10,329,639
effective search space: 8718215316
effective search space used: 8718215316
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)